TKT RNAseq Experiment: Differential Expression Analysis

Return to Home Page

Table of Contents

All samples processed together

• Figure 1: MDS plot, all samples

• Figure 2: Barplot of Total DEGs

Male and female samples processed together with TEs and outlier libraries removed

• Figure 3: MDS plot, all samples

• Figure 4: Barplot of Total DEGs

Male and Female samples processed separately with TEs and outlier libraries removed

• Figure 5: MDS plot of female samples only

• Figure 6: MDS plot of male samples only

• Figure 7: Barplot of Total DEGs

Figure 1: MDS plot, all samples.

Figure 2: Barplot of Total DEGs, all samples.

Figure 3: MDS plot, all samples, TEs and outlier libraries removed.

Figure 4: Barplot of Total DEGs, all samples, TEs and outlier libraries removed.

Figure 5: MDS plot, females only, TEs and outliers removed.

Figure 6: MDS plot, males, TEs and outlier libraries removed.

Figure 7: Barplot of Total DEGs, males and females processed separately, TEs and outlier libraries removed.

Figure 8: Barplot of Total DEGs excluding TEs.

Figure 9: Heatmaps of Total DEGs in GR.FC x GR.FDf.